bit: a multipurpose collection of bioinformatics tools

نویسندگان

چکیده

bit is a collection of small scripts and programs that facilitate many common tasks in bioinformatics. It operates Unix-like command-line environment comprised bash python code. bit openly available on GitHub, archived with Zenodo, conda installable. The package useful for users who want to do things such as manipulate fasta files, calculate GC content, quickly summarize nucleotide assemblies, easily download assemblies from NCBI just based accessions, pull amino-acid sequences GenBank Shannon uncertainty columns multiple sequence alignments, more. source code hosted GitHub: github.com/AstrobioMike/bit

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ژورنال

عنوان ژورنال: F1000Research

سال: 2022

ISSN: ['2046-1402']

DOI: https://doi.org/10.12688/f1000research.79530.1